Transcriptome Assembly
========================================

.. contents:: Modules included in this section
   :local:
   :depth: 1


.. automodule:: neatseq_flow_modules.main_NSF_classes.RNA_seq.trinity

.. automodule:: neatseq_flow_modules.main_NSF_classes.RNA_seq.add_trinity_tags

.. automodule:: neatseq_flow_modules.RNA_seq.Trinity_gene_to_trans_map

.. automodule:: neatseq_flow_modules.RNA_seq.trinity_mapping

.. automodule:: neatseq_flow_modules.RNA_seq.trinity_statistics

.. automodule:: neatseq_flow_modules.Liron.RSEM_module.RSEM

.. automodule:: neatseq_flow_modules.main_NSF_classes.Assembly.quast

.. automodule:: neatseq_flow_modules.mapping.htseq_count